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  • Generating and Showcasing AutoMated tool for Antifungal resistance Surveillance System (AMASS-FUNGI)

    Project lead

    Direk Limmathurotsakul – University of Oxford, United Kingdom

    Co-applicants

    Adilia Warris – University of Exeter, United Kingdom

    Collaborators

    Suwimon Khusuwan – Chiangrai Prachanukroh Hospital, Thailand

    Manat Sitthichai – Phrachomklao Hospital, Thailand

    Niran Jankong – Chaoprayayommarat Hospital, Thailand

    Suwatthiya Kitsaran – Sunpasitthiprasong Hospital, Thailand

    Panida Chamawan – Ministry of Public Health, Thailand

     

    Geographical focus

    Thailand

    Research theme

    Innovative platforms

    Organism/pathogen

    Fungal organisms causing fungemia including  Candida albicans, Candida auris, Cryptococcus neoformans, Candida parapsilosis, Candida tropicalis, Nakaseomyces grabrata (C. glabrata), Histoplasma spp., Fusarium spp., Other fungal species

    Lay summary:

    Antifungal resistance (AFR) is an emerging treat challenging effective antifungal treatment and negatively impacting patient outcomes. However, tools for surveillance of AFR are lacking in many low- and middle-income countries (LMICs). Furthermore, fungi have been excluded from most antimicrobial resistance (AMR) surveillance programmes. 

    We aim to fill this gap by expanding our novel and well-established AMR surveillance tool, AMASS (AutoMated tool for Antimicrobial resistance Surveillance System), to simultaneously monitor and evaluate the burden of fungemia and AFR in Thailand. 

    AMASS is an open-access and easy-to-use application enabling hospitals to automatically generate hospital-specific antibiotic-resistant bacterial infection surveillance reports using their own microbiology and hospital admission data files. Over 100 hospitals in Thailand have now implemented this tool under the implementation of the Ministry of Public Health. 

    We propose to expand AMASS to include an additional module focussing on AFR in fungemia (AMASS-FUNGI). We will then apply AMASS-FUNGI, and report the edidemiology of AFR in fungemia in individual-level data from 2019 to 2022 from four public hospitals. These hospitals include Chiangrai Prachanukroh Hospital (757-bed) in Chiang Rai province, Phrachomklao Hospital (463-bed) in Phetchaburi province, Chaoprayayommarat Hospital (738-bed) in Suphanburi province, and Sunpasitthiprasong Hospital (1,188-bed) in Ubon Ratchathani province, Thailand. 

    Our expected outcomes are to demonstrate the usefulness of AMASS-FUNGI in the surveillance of AFR and its suitability for LMICs. This tool will be made open-access. This study will provide a pathway to implement AMASS-FUNGI in >100 hospitals in Thailand, and build capacity to routinely and systematically include AFR in AMR programmes.